Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-(acyl-carrier-protein) synthase 3 | CK234_01196 | Not Available | Positive | 1581706 - 1582713 | 36993.6 |
| era-like gtpase | CK234_01197 | Not Available | Positive | 1582796 - 1583677 | 33673.8 |
| der-like gtpase | CK234_01198 | Not Available | Positive | 1583711 - 1585024 | 49388.4 |
| metn-like methionine import atp-binding protein | CK234_01199 | Not Available | Negative | 1585102 - 1585866 | 28893.9 |
| putative phospholipid abc transporter permease protein, mlae-like | CK234_01200 | Not Available | Negative | 1585863 - 1586630 | 28330.7 |
| putative lipopolysaccharide export system atp-binding protein, lptb-like | CK234_01201 | Not Available | Positive | 1586735 - 1587556 | 31018.3 |
| splicing factor, cc1-like family | CK234_01202 | Not Available | Negative | 1587633 - 1587878 | 9049.81 |
| trigger factor | CK234_01203 | Not Available | Positive | 1588260 - 1589615 | 51558.8 |
| atp-dependent clp protease proteolytic subunit | CK234_01204 | Not Available | Positive | 1589796 - 1590467 | 24864.8 |
| putative atp-dependent clp protease atp-binding subunit, clpx-like | CK234_01205 | Not Available | Positive | 1590591 - 1591841 | 46679.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

