Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase | CK234_00085 | Not Available | Positive | 118112 - 118714 | 22635.2 |
| yihy family inner membrane protein | CK234_00086 | Not Available | Negative | 118847 - 120175 | 50578.4 |
| putative chaperone modulatory protein, cbpm-like | CK234_00087 | Not Available | Negative | 120844 - 121131 | 11413.6 |
| curved dna-binding protein | CK234_00088 | Not Available | Negative | 121147 - 122118 | 35210.0 |
| putative signal transduction histidine-protein kinase, bara-like | CK234_00089 | Not Available | Positive | 122165 - 124168 | 75570.5 |
| putative trifunctional nucleotide phosphoesterase protein, yfkn precursor-like | CK234_00090 | Not Available | Positive | 124180 - 125922 | 65591.8 |
| hypothetical protein | CK234_00091 | Not Available | Positive | 125927 - 126265 | 12711.8 |
| colicin i receptor precursor | CK234_00092 | Not Available | Positive | 126397 - 128730 | 87165.8 |
| l-lysine 2,3-aminomutase | CK234_00093 | Not Available | Negative | 128819 - 130930 | 81915.2 |
| beta-l-arabinobiosidase precursor | CK234_00094 | Not Available | Positive | 131250 - 134561 | 126729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

