Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative solvent efflux pump periplasmic linker, srpa precursor-like | CK234_01146 | Not Available | Negative | 1519801 - 1520868 | 39243.2 |
| btr-like hth-type transcriptional activator | CK234_01147 | Not Available | Positive | 1521045 - 1521923 | 34389.8 |
| hypothetical protein | CK234_01148 | Not Available | Positive | 1521989 - 1522753 | 29921.8 |
| glucosamine-6-phosphate deaminase 1 | CK234_01149 | Not Available | Negative | 1522929 - 1524917 | 74771.3 |
| glucosamine-6-phosphate deaminase | CK234_01150 | Not Available | Negative | 1524921 - 1525712 | 29021.6 |
| l-galactonate transporter | CK234_01151 | Not Available | Negative | 1525758 - 1526993 | 44657.5 |
| cellobiose 2-epimerase | CK234_01152 | Not Available | Negative | 1527012 - 1528208 | 46212.1 |
| n-acetylneuraminate lyase | CK234_01153 | Not Available | Negative | 1528221 - 1529135 | 33910.9 |
| n-acetylglucosamine repressor | CK234_01154 | Not Available | Positive | 1529441 - 1530646 | 44559.1 |
| putative rna polymerase sigma factor, sigm-like | CK234_01155 | Not Available | Positive | 1530759 - 1531394 | 24920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

