Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative response regulator, mpra-like | CK234_01136 | Not Available | Negative | 1505610 - 1506263 | 24985.1 |
| putative alkaline phosphatase synthesis sensor protein, phor-like | CK234_01137 | Not Available | Negative | 1506334 - 1507653 | 50525.4 |
| glpgli family protein | CK234_01138 | Not Available | Positive | 1507939 - 1508805 | 32859.3 |
| carboxypeptidase regulatory-like domain protein | CK234_01139 | Not Available | Positive | 1508810 - 1511470 | 102324.0 |
| putative abc-type transporter atp-binding protein, ecsa-like | CK234_01140 | Not Available | Negative | 1511527 - 1512204 | 25555.1 |
| hypothetical protein | CK234_01141 | Not Available | Negative | 1512201 - 1513130 | 35547.2 |
| hypothetical protein | CK234_01142 | Not Available | Negative | 1513268 - 1513939 | 25597.6 |
| putative dna-binding protein, histone-like | CK234_01143 | Not Available | Positive | 1514422 - 1515048 | 23816.8 |
| putative type i secretion outer membrane protein, tolc family-like | CK234_01144 | Not Available | Negative | 1515263 - 1516630 | 50983.2 |
| putative efflux pump membrane transporter, bepe-like | CK234_01145 | Not Available | Negative | 1516676 - 1519801 | 115862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

