Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-hexosaminidase | Not Available | Not Available | Positive | 1486384 - 1488390 | 77061.3 |
| gdsl-like lipase/acylhydrolase family protein | CK234_01127 | Not Available | Positive | 1488392 - 1489057 | 25131.8 |
| acetylxylan esterase precursor | CK234_01128 | Not Available | Positive | 1489054 - 1491117 | 77671.2 |
| exo-beta-d-glucosaminidase precursor | CK234_01129 | Not Available | Positive | 1491144 - 1493711 | 98692.7 |
| beta-hexosaminidase | Not Available | Not Available | Positive | 1493728 - 1496052 | 86341.0 |
| n-acetylneuraminate epimerase precursor | CK234_01131 | Not Available | Positive | 1496143 - 1497366 | 44505.4 |
| beta-hexosaminidase | Not Available | Not Available | Positive | 1497363 - 1499417 | 77101.7 |
| putative alpha-1,2-mannosidase | CK234_01133 | Not Available | Positive | 1499444 - 1501696 | 85450.5 |
| beta-galactosidase | CK234_01134 | Not Available | Positive | 1501699 - 1504203 | 94048.9 |
| n-acetylglucosamine-6-phosphate deacetylase | CK234_01135 | Not Available | Positive | 1504378 - 1505541 | 42239.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

