Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i, archaeal type | CK234_01116 | Not Available | Positive | 1472243 - 1472710 | 18099.4 |
| protein of unknown function (duf1343) | CK234_01117 | Not Available | Negative | 1472738 - 1473898 | 43608.9 |
| hypothetical protein | CK234_01118 | Not Available | Positive | 1473952 - 1474488 | 20311.5 |
| hypothetical protein | CK234_01119 | Not Available | Positive | 1474579 - 1477314 | 103837.0 |
| uracil-dna glycosylase | CK234_01120 | Not Available | Negative | 1477404 - 1478066 | 24957.5 |
| aspartate--ammonia ligase | CK234_01121 | Not Available | Negative | 1478184 - 1479224 | 39770.2 |
| Trna-arg | Not Available | Not Available | Positive | 1479427 - 1479501 | Not Available |
| tonb-linked outer membrane protein, susc/raga family | CK234_01123 | Not Available | Positive | 1479861 - 1483085 | 119694.0 |
| susd family protein | CK234_01124 | Not Available | Positive | 1483105 - 1484607 | 56986.5 |
| sialidase precursor | CK234_01125 | Not Available | Positive | 1484740 - 1486380 | 60315.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

