Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_01086 | Not Available | Positive | 1435686 - 1437470 | 69421.1 |
| putative k(+)-stimulated pyrophosphate-energized sodium pump | CK234_01087 | Not Available | Negative | 1437540 - 1439744 | 76980.7 |
| putative arsenical resistance operon trans-acting repressor, arsd-like | CK234_01088 | Not Available | Negative | 1440092 - 1440418 | 12047.8 |
| cytochrome c biogenesis protein transmembrane region | CK234_01089 | Not Available | Negative | 1440454 - 1441161 | 25781.8 |
| hypothetical protein | CK234_01090 | Not Available | Negative | 1441163 - 1441606 | 16803.2 |
| small redox-active disulfide protein 2 | CK234_01091 | Not Available | Negative | 1441617 - 1441850 | 8315.35 |
| putative hth-type transcriptional regulator, ygav-like | CK234_01092 | Not Available | Negative | 1441928 - 1442254 | 12236.9 |
| putative cystathionine beta-lyase, patb-like | CK234_01093 | Not Available | Negative | 1442776 - 1443939 | 44389.1 |
| protein of unknown function (duf3737) | CK234_01094 | Not Available | Negative | 1443949 - 1444815 | 33228.2 |
| x-pro dipeptidyl-peptidase (s15 family) | CK234_01095 | Not Available | Negative | 1444931 - 1445986 | 39316.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

