Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf1972) | CK234_01076 | Not Available | Positive | 1422940 - 1424070 | 43845.0 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CK234_01077 | Not Available | Positive | 1424077 - 1424916 | 31890.0 |
| putative aaa-atpase | CK234_01078 | Not Available | Positive | 1424993 - 1426564 | 60292.7 |
| dna phosphorothioation system restriction enzyme | CK234_01079 | Not Available | Positive | 1426704 - 1429106 | 91141.8 |
| (r)-stereoselective amidase | CK234_01080 | Not Available | Positive | 1429336 - 1430097 | 28467.8 |
| indolepyruvate ferredoxin oxidoreductase, alpha subunit | CK234_01081 | Not Available | Positive | 1430121 - 1431737 | 58830.6 |
| indolepyruvate ferredoxin oxidoreductase, beta subunit | CK234_01082 | Not Available | Positive | 1431734 - 1432315 | 21245.8 |
| putative glutamate-pyruvate aminotransferase, alac-like | CK234_01083 | Not Available | Positive | 1432320 - 1433624 | 48672.3 |
| phenylacetate-coenzyme a ligase | CK234_01084 | Not Available | Positive | 1433746 - 1435020 | 47435.1 |
| act domain protein | CK234_01085 | Not Available | Positive | 1435034 - 1435450 | 15370.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

