Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-(acyl-carrier-protein) synthase 3 | CK234_01056 | Not Available | Positive | 1403764 - 1404741 | 35909.1 |
| tyrocidine synthase 1 | CK234_01057 | Not Available | Positive | 1404743 - 1406254 | 57257.4 |
| ribosomal-protein-alanine acetyltransferase | CK234_01058 | Not Available | Positive | 1406291 - 1407091 | 31821.7 |
| d-alanine--poly(phosphoribitol) ligase subunit 2 | CK234_01059 | Not Available | Positive | 1407094 - 1407330 | 8783.45 |
| 2,5-diketo-d-gluconic acid reductase a | CK234_01060 | Not Available | Positive | 1407405 - 1408325 | 35430.9 |
| mate-like multi antimicrobial extrusion protein | CK234_01061 | Not Available | Positive | 1408457 - 1409983 | 57686.1 |
| n-acetylmuramoyl-l-alanine amidase | CK234_01062 | Not Available | Negative | 1410566 - 1410979 | 15257.5 |
| putative dna-binding protein, histone-like | CK234_01063 | Not Available | Negative | 1411129 - 1411602 | 16847.1 |
| protein of unknown function (duf4248) | CK234_01064 | Not Available | Positive | 1411883 - 1412122 | 9222.05 |
| dna primase, catalytic core | CK234_01065 | Not Available | Negative | 1412231 - 1414237 | 74894.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

