Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aspartate aminotransferase and l-aspartate beta-decarboxylase | CK234_01046 | Not Available | Negative | 1387758 - 1389398 | 62633.3 |
| aspartate/alanine antiporter | CK234_01047 | Not Available | Negative | 1389418 - 1391118 | 61072.4 |
| hypothetical protein | CK234_01048 | Not Available | Positive | 1391244 - 1392065 | 31598.5 |
| putative pep-cterm system tpr-repeat lipoprotein | CK234_01049 | Not Available | Negative | 1392057 - 1394234 | 85961.3 |
| protein of unknown function (duf418) | CK234_01050 | Not Available | Negative | 1394296 - 1395480 | 45032.6 |
| transcription-repair-coupling factor | CK234_01051 | Not Available | Positive | 1395588 - 1398953 | 127066.0 |
| tonb family c-terminal domain protein | CK234_01052 | Not Available | Positive | 1399218 - 1399904 | 25600.7 |
| hypothetical protein | CK234_01053 | Not Available | Positive | 1400491 - 1401321 | 31555.8 |
| virginiamycin a acetyltransferase | CK234_01054 | Not Available | Positive | 1401697 - 1403520 | 68641.6 |
| hypothetical protein | CK234_01055 | Not Available | Positive | 1403534 - 1403767 | 8794.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

