Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4369) | CK234_01036 | Not Available | Positive | 1378349 - 1379026 | 25343.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CK234_01037 | Not Available | Negative | 1379041 - 1379799 | 28645.4 |
| putative metallophosphoesterase | CK234_01038 | Not Available | Negative | 1379839 - 1380999 | 43715.4 |
| methionine synthase | CK234_01039 | Not Available | Negative | 1381014 - 1381901 | 33419.9 |
| allantoinase | CK234_01040 | Not Available | Negative | 1381898 - 1383238 | 49645.5 |
| undecaprenyl-phosphate mannosyltransferase | CK234_01041 | Not Available | Negative | 1383235 - 1383984 | 28446.6 |
| outer membrane protein beta-barrel domain protein | CK234_01042 | Not Available | Negative | 1384137 - 1384763 | 23477.8 |
| protein of unknown function (duf4136) | CK234_01043 | Not Available | Negative | 1384805 - 1385443 | 24018.1 |
| putative lipoprotein, nlpe precursor-like | CK234_01044 | Not Available | Negative | 1385567 - 1386055 | 17145.3 |
| putative ctpa-like serine protease | CK234_01045 | Not Available | Negative | 1386212 - 1387609 | 52241.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

