Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain protein | CK234_01026 | Not Available | Negative | 1365248 - 1366324 | 41122.7 |
| protein of unknown function (duf3853) | CK234_01027 | Not Available | Negative | 1366339 - 1366605 | 9616.76 |
| hypothetical protein | CK234_01028 | Not Available | Negative | 1366871 - 1367908 | 41498.9 |
| protein of unknown function (duf1016) | CK234_01029 | Not Available | Negative | 1367914 - 1369212 | 49343.9 |
| putative tyrosine recombinase, xerc-like | CK234_01030 | Not Available | Negative | 1369280 - 1370563 | 50443.3 |
| dna polymerase iii subunit tau | CK234_01031 | Not Available | Negative | 1371098 - 1372909 | 67537.0 |
| putative cell division protein, ftsl-like | CK234_01032 | Not Available | Positive | 1373028 - 1373324 | 11882.5 |
| hypothetical protein | CK234_01033 | Not Available | Positive | 1373348 - 1373665 | 12033.2 |
| peptidase s46 | CK234_01034 | Not Available | Negative | 1373783 - 1375969 | 82680.6 |
| peptidase s46 | CK234_01035 | Not Available | Negative | 1375969 - 1378134 | 81202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

