Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine deiminase | CK234_01016 | Not Available | Positive | 1355421 - 1356341 | 35568.8 |
| amidinotransferase | CK234_01017 | Not Available | Positive | 1356364 - 1357275 | 34240.9 |
| ornithine aminotransferase | CK234_01018 | Not Available | Positive | 1357290 - 1358525 | 45652.0 |
| conserved hypothetical integral membrane protein | CK234_01019 | Not Available | Positive | 1358814 - 1359500 | 25083.7 |
| 7-cyano-7-deazaguanine synthase | CK234_01020 | Not Available | Positive | 1359621 - 1360292 | 24954.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | CK234_01021 | Not Available | Positive | 1360511 - 1360966 | 17765.2 |
| Trna-ser | Not Available | Not Available | Positive | 1361054 - 1361144 | Not Available |
| extended-spectrum beta-lactamase per-1 precursor | CK234_01023 | Not Available | Positive | 1361380 - 1362345 | 35604.1 |
| hypothetical protein | CK234_01024 | Not Available | Negative | 1362449 - 1363852 | 54384.4 |
| dna primase, catalytic core | CK234_01025 | Not Available | Negative | 1364077 - 1365033 | 36652.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

