Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_01006 | Not Available | Negative | 1346441 - 1346593 | 5857.31 |
| aminodeoxychorismate synthase component 1 | CK234_01007 | Not Available | Positive | 1346735 - 1347718 | 37506.0 |
| amino-transferase class iv | CK234_01008 | Not Available | Positive | 1347702 - 1348295 | 22693.3 |
| hypothetical protein | CK234_01009 | Not Available | Positive | 1348385 - 1349527 | 43039.4 |
| bacillibactin exporter | CK234_01010 | Not Available | Negative | 1349524 - 1350720 | 43918.7 |
| phenylalanine--trna ligase alpha subunit | CK234_01011 | Not Available | Negative | 1350848 - 1351882 | 39011.7 |
| protein of unknown function (duf4348) | CK234_01012 | Not Available | Positive | 1351994 - 1352854 | 33508.7 |
| udp-n-acetylenolpyruvoylglucosamine reductase | CK234_01013 | Not Available | Positive | 1352893 - 1353879 | 36526.8 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | CK234_01014 | Not Available | Positive | 1353888 - 1354664 | 29140.4 |
| endonuclease iii | CK234_01015 | Not Available | Negative | 1354659 - 1355303 | 24101.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

