Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative thiol-disulfide oxidoreductase, resa-like | CK234_00996 | Not Available | Positive | 1325846 - 1327024 | 44862.0 |
| beta-galactosidase | CK234_00997 | Not Available | Positive | 1327641 - 1329455 | 69346.5 |
| aldose 1-epimerase precursor | CK234_00998 | Not Available | Positive | 1329461 - 1330594 | 42509.3 |
| putative sensor histidine kinase, tods-like | CK234_00999 | Not Available | Positive | 1330777 - 1334727 | 152165.0 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01000 | Not Available | Positive | 1335043 - 1338042 | 112088.0 |
| susd family protein | CK234_01001 | Not Available | Positive | 1338064 - 1339653 | 61771.0 |
| glycosyl hydrolases family 43 | CK234_01002 | Not Available | Positive | 1339733 - 1342366 | 101166.0 |
| intracellular endo-alpha-(1->5)-l-arabinanase | CK234_01003 | Not Available | Positive | 1342386 - 1343342 | 36526.4 |
| putative extracellular exo-alpha-(1->5)-l-arabinofuranosidase, arba precursor-like | CK234_01004 | Not Available | Positive | 1343339 - 1344340 | 37472.1 |
| hypothetical protein | CK234_01005 | Not Available | Positive | 1344360 - 1346393 | 77627.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

