Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative multidrug resistance protein, mdtk-like | CK234_00986 | Not Available | Positive | 1311590 - 1312912 | 48726.4 |
| signal recognition particle protein | CK234_00987 | Not Available | Positive | 1313011 - 1314333 | 48854.7 |
| fold-like putative bifunctional protein | CK234_00988 | Not Available | Positive | 1314447 - 1315328 | 31535.7 |
| putative capsule biosynthesis protein, capa-like | CK234_00989 | Not Available | Positive | 1316264 - 1317337 | 40883.5 |
| Trna-his | Not Available | Not Available | Positive | 1317413 - 1317489 | Not Available |
| putative ecf rna polymerase sigma factor, sigl-like | CK234_00991 | Not Available | Positive | 1317568 - 1318131 | 22444.1 |
| protein of unknown function (duf4974) | CK234_00992 | Not Available | Positive | 1318204 - 1319286 | 41467.0 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00993 | Not Available | Positive | 1319330 - 1322860 | 132036.0 |
| starch-binding associating with outer membrane | CK234_00994 | Not Available | Positive | 1322871 - 1324355 | 56376.7 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_00995 | Not Available | Positive | 1324471 - 1325838 | 51271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

