Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative chromosomal replication initiator protein, dnaa-like | CK234_00966 | Not Available | Negative | 1283365 - 1284771 | 53559.4 |
| virulence factor mce family protein | CK234_00967 | Not Available | Negative | 1285109 - 1285996 | 32671.6 |
| putative n-acetylmuramoyl-l-alanine amidase, amia precursor-like | CK234_00968 | Not Available | Negative | 1286016 - 1287245 | 46293.8 |
| bile acid transporter | CK234_00969 | Not Available | Positive | 1287402 - 1288358 | 35439.4 |
| hypothetical protein | CK234_00970 | Not Available | Positive | 1288541 - 1288768 | 8722.8 |
| colicin i receptor precursor | CK234_00971 | Not Available | Positive | 1289285 - 1291462 | 81758.6 |
| hypothetical protein | CK234_00972 | Not Available | Positive | 1291702 - 1291875 | 6836.66 |
| hypothetical protein | CK234_00973 | Not Available | Negative | 1291856 - 1292416 | 21317.7 |
| hypothetical protein | CK234_00974 | Not Available | Negative | 1292428 - 1293921 | 56007.7 |
| aerobic c4-dicarboxylate transport protein | CK234_00975 | Not Available | Negative | 1294031 - 1295212 | 42259.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

