Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-responsive regulatory protein | CK234_00065 | Not Available | Negative | 96321 - 96818 | 19094.3 |
| hypothetical protein | CK234_00066 | Not Available | Positive | 96971 - 97396 | 15949.3 |
| putative inner membrane protein, yqja-like | CK234_00067 | Not Available | Positive | 97529 - 98173 | 24501.6 |
| putative pit accessory protein | CK234_00068 | Not Available | Positive | 98267 - 98860 | 22936.6 |
| low-affinity inorganic phosphate transporter 1 | CK234_00069 | Not Available | Positive | 98877 - 99890 | 36114.1 |
| hypothetical protein | CK234_00070 | Not Available | Positive | 100029 - 100391 | 13832.0 |
| putative tonb-dependent receptor precursor | CK234_00071 | Not Available | Positive | 100440 - 102599 | 82018.8 |
| protein of unknown function (duf4625) | CK234_00072 | Not Available | Positive | 102596 - 103084 | 17879.0 |
| methionine gamma-lyase | CK234_00073 | Not Available | Positive | 103352 - 104638 | 46224.8 |
| l-lactate permease | CK234_00074 | Not Available | Positive | 104900 - 106399 | 53058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

