Bacteroides thetaiotaomicron

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides thetaiotaomicron is a Gram-negative, rod-shaped bacterium that thrives as an obligate anaerobe and is classified as a chemoheterotroph, utilizing organic compounds as its energy source. This microbe is commonly found in the human gut, where it plays a crucial role in the digestion of complex carbohydrates and the synthesis of essential nutrients. As a member of the Bacteroidetes phylum, B. thetaiotaomicron is particularly adept at breaking down dietary fibers and resistant starches that are otherwise indigestible to humans. This capacity allows it to release short-chain fatty acids, which are vital for maintaining gut health and modulating the immune response. Its preference for anaerobic conditions aligns with its habitat in the intestines, where oxygen levels are low, thus enabling it to thrive in an environment that would be hostile to many other microbes. In terms of morphology, B. thetaiotaomicron is characterized by its rod shape and size, typically measuring 0.5 to 0.8 micrometers in diameter and 1.0 to 3.0 micrometers in length. The organism's Gram-negative cell wall structure, consisting of a thin peptidoglycan layer surrounded by an outer membrane, contributes to its resilience in the competitive gut environment. Beyond its role in digestion, B. thetaiotaomicron is also significant in research, particularly in the fields of microbiome studies and gut health. Its ability to interact with host immune cells and modulate inflammatory responses has garnered attention in the context of diseases such as inflammatory bowel disease (IBD) and obesity. Furthermore, the bacterium's genetic tractability makes it a valuable model organism for studying microbial interactions and metabolic pathways within the human microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides thetaiotaomicron
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides thetaiotaomicron
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides thetaiotaomicron

Accession NumberQRUV00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4524 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
arabinan endo-1%2c5-alpha-l-arabinosidaseERS852511_00001Q93HT9-368 - 229371695.8
susd family.ERS852511_00002Not Available-2329 - 413467848.8
outer membrane receptor proteins%2c mostly fe transportERS852511_00003Not Available-4160 - 7303118121.0
susd family.ERS852511_00004Not Available-7314 - 908966881.9
outer membrane receptor for ferrienterochelin and colicinsERS852511_00005Not Available-9102 - 12185116334.0
uncharacterized conserved proteinERS852511_00006Not Available-12205 - 1451483867.0
two-component system sensor histidine kinase/response regulatorERS852511_00007Not Available-14744 - 19006162660.0
endo-arabinaseERS852511_00008A5IKD4+19162 - 2070358717.1
alpha-l-arabinofuranosidaseERS852511_00009P82593+20729 - 2271174833.6
beta-xylosidaseERS852511_00010P45796+22734 - 2367835611.8

Displaying genes 1 – 10 of 10647 in total

Pathways

24 pathways

Metabolites

89 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017691PS(14:0/18:1(11Z))C38H72NO10PChemical structure of PS(14:0/18:1(11Z))NULL
Average733.965Da
Monoisotopic733.48938452Da
BASm0017737PG(14:1(7Z)/14:1(7Z))C34H63O10PChemical structure of PG(14:1(7Z)/14:1(7Z))NULL
Average662.842Da
Monoisotopic662.415885227Da
BASm0017743Stearoyl-CoAC39H70N7O17P3SChemical structure of Stearoyl-CoA362-66-3
Average1033.996Da
Monoisotopic1033.376174075Da
BASm0017775PE(12:0/14:0)C31H62NO8PChemical structure of PE(12:0/14:0)NULL
Average607.81Da
Monoisotopic607.421304958Da
BASm0017777PE(12:0/16:0)C33H66NO8PChemical structure of PE(12:0/16:0)NULL
Average635.864Da
Monoisotopic635.452605087Da
BASm0017778PE(12:0/16:1(9Z))C33H64NO8PChemical structure of PE(12:0/16:1(9Z))NULL
Average633.848Da
Monoisotopic633.436955023Da
BASm0017781PE(12:0/18:1(11Z))C35H68NO8PChemical structure of PE(12:0/18:1(11Z))NULL
Average661.902Da
Monoisotopic661.468255152Da
BASm0018523CDP-DG(12:0/14:0)C38H69N3O15P2Chemical structure of CDP-DG(12:0/14:0)NULL
Average869.924Da
Monoisotopic869.42039253Da
BASm0018525CDP-DG(12:0/16:0)C40H73N3O15P2Chemical structure of CDP-DG(12:0/16:0)NULL
Average897.978Da
Monoisotopic897.451692659Da
BASm0018526CDP-DG(12:0/16:1(9Z))C40H71N3O15P2Chemical structure of CDP-DG(12:0/16:1(9Z))NULL
Average895.962Da
Monoisotopic895.436042594Da

Displaying 21–30 of 89 metabolites