Bacteroides thetaiotaomicron

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides thetaiotaomicron is a Gram-negative, rod-shaped bacterium that is classified as an anaerobe, thriving in environments devoid of oxygen. This microbe possesses a unique cellular structure, characterized by two membranes and true flagella, although it does not exhibit motility. The species is mesophilic, indicating its optimal growth occurs at moderate temperatures. Bacteroides thetaiotaomicron is primarily host-associated, engaging in a free-living biotic relationship. It has three replicons, suggesting a complex genomic architecture that may contribute to its adaptability and functional diversity. The genome accessions available for this species include QRUV00000000.1, CZAP00000000.1, and CZBI00000000.1, which can provide further insights into its genetic makeup and potential functionalities. Notably, Bacteroides thetaiotaomicron is integral to the gastrointestinal microbiota of many hosts, playing a crucial role in the degradation of complex carbohydrates. This capability highlights its importance in nutrient metabolism and host health, suggesting that it may influence digestive processes and the overall homeostasis of the gut ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides thetaiotaomicron
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides thetaiotaomicron
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Equidae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides thetaiotaomicron strain 2789STDY5834899 genome

Gene Summary

Adenine Count

1827670 bp

Thymine Count

1814431 bp

Guanine Count

1353694 bp

Cytosine Count

1401706 bp

Genome Length

6400343 bp

Protein-coding Genes

5036 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinERS852557_01608Not AvailablePositive2138810 - 213925917531.4
the (largely gram-negative bacterial) hydrophobe/amphiphile efflux-1 (hae1) familyERS852557_01609Not AvailableNegative2139383 - 2142529113587.0
cation efflux pumpERS852557_01610Not AvailableNegative2142612 - 214372140433.8
outer membrane efflux protein oprmERS852557_01611Not AvailableNegative2143755 - 214515251707.7
zn-ribbon protein%2c possibly nucleic acid-bindingERS852557_01612Not AvailableNegative2145290 - 214612032034.4
metal-binding proteinERS852557_01613Not AvailableNegative2146126 - 214722040416.7
uncharacterised proteinERS852557_01614Not AvailablePositive2147327 - 214774015837.2
uncharacterised proteinERS852557_01615Not AvailableNegative2147778 - 214805610945.2
putative abc transport system%2c membrane proteinERS852557_01616Not AvailableNegative2148053 - 214884729635.8
abc transporter atp-binding proteinERS852557_01617Not AvailableNegative2148882 - 214950222828.8

Displaying genes 2701 – 2710 of 10647 in total

Metabolites

62 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001680methanophenazineC37H50N2OChemical structure of methanophenazineNot available
Average538.82Da
Monoisotopic538.3923142Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 1–10 of 62 metabolites

Health Effects

No health effects information available for this bacterium.