Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW08_22610 | Not Available | Positive | 5145408 - 5147192 | 67834.7 |
| gfo/idh/moca family oxidoreductase | DWW08_22615 | Not Available | Negative | 5147275 - 5148525 | 46881.3 |
| Trna-gly | Not Available | Not Available | Positive | 5148587 - 5148662 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5148668 - 5148753 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | DWW08_22630 | Not Available | Negative | 5148826 - 5149320 | 17717.3 |
| tetratricopeptide repeat protein | DWW08_22635 | Not Available | Negative | 5149406 - 5150089 | 24715.4 |
| dna replication and repair protein recf | DWW08_22640 | Not Available | Positive | 5150250 - 5151362 | 42841.5 |
| duf721 domain-containing protein | DWW08_22645 | Not Available | Positive | 5151359 - 5151649 | 11217.8 |
| php domain-containing protein | DWW08_22650 | Not Available | Negative | 5151770 - 5152558 | 30918.5 |
| 5-formyltetrahydrofolate cyclo-ligase | DWW08_22655 | Not Available | Negative | 5152555 - 5153085 | 20200.4 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



