Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphatase | DWW08_20555 | Not Available | Negative | 4711804 - 4712790 | 36994.9 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWW08_20560 | Not Available | Negative | 4712864 - 4714387 | 57775.0 |
| susc/raga family tonb-linked outer membrane protein | DWW08_20565 | Not Available | Negative | 4714399 - 4717785 | 126566.0 |
| fecr family protein | DWW08_20570 | Not Available | Negative | 4717959 - 4718924 | 36863.2 |
| arabinan endo-1,5-alpha-l-arabinosidase | DWW08_20575 | Not Available | Negative | 4719564 - 4720556 | 37237.0 |
| rna polymerase sigma-70 factor | DWW08_20580 | Not Available | Negative | 4720619 - 4721164 | 21817.3 |
| duf5110 domain-containing protein | DWW08_20585 | Not Available | Positive | 4721297 - 4723834 | 97663.8 |
| hypothetical protein | DWW08_20590 | Not Available | Positive | 4723801 - 4723980 | 6964.56 |
| catalase | DWW08_20595 | Not Available | Positive | 4724052 - 4725512 | 55868.6 |
| trka family potassium uptake protein | DWW08_20600 | Not Available | Negative | 4725607 - 4726293 | 25540.0 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



