Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW170_04370 | Not Available | Positive | 889413 - 892748 | 123235.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW170_04375 | Not Available | Positive | 892778 - 894475 | 63659.9 |
| duf1343 domain-containing protein | DW170_04380 | Not Available | Positive | 894696 - 895865 | 43982.7 |
| sodium:solute symporter | DW170_04385 | Not Available | Positive | 895906 - 897363 | 54482.9 |
| xanthan lyase | DW170_04390 | Not Available | Positive | 897366 - 900437 | 115052.0 |
| serine/threonine protein kinase | DW170_04395 | Not Available | Positive | 900533 - 902398 | 69730.7 |
| glycosyltransferase family 2 protein | DW170_04400 | Not Available | Positive | 902422 - 903888 | 55706.3 |
| duf4922 domain-containing protein | DW170_04405 | Not Available | Positive | 903885 - 904817 | 35304.6 |
| spoiid/lytb domain-containing protein | DW170_04410 | Not Available | Positive | 904814 - 906169 | 51434.4 |
| mfs transporter | DW170_04415 | Not Available | Positive | 906185 - 907483 | 48013.6 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



