Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | DWW08_18460 | Not Available | Positive | 4273825 - 4274751 | 35535.9 |
| aspartate carbamoyltransferase regulatory subunit | DWW08_18465 | Not Available | Positive | 4274756 - 4275217 | 17381.4 |
| flavin reductase family protein | DWW08_18470 | Not Available | Positive | 4275306 - 4275875 | 21400.9 |
| port family protein | DWW08_18475 | Not Available | Positive | 4275880 - 4276608 | 28194.9 |
| serine hydroxymethyltransferase | DWW08_18480 | Not Available | Positive | 4276716 - 4277996 | 46888.6 |
| hypothetical protein | DWW08_18485 | Not Available | Positive | 4278180 - 4278890 | 26672.4 |
| formate--tetrahydrofolate ligase | DWW08_18490 | Not Available | Negative | 4278978 - 4280645 | 60404.1 |
| sensor histidine kinase | DWW08_18495 | Not Available | Positive | 4280813 - 4282822 | 77700.2 |
| signal protein | DWW08_18500 | Not Available | Negative | 4282849 - 4284960 | 80747.2 |
| pyridoxal phosphate-dependent aminotransferase | DWW08_18505 | Not Available | Negative | 4285076 - 4286290 | 46235.8 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



