Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW08_18410 | Not Available | Positive | 4260088 - 4263357 | 120921.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_18415 | Not Available | Positive | 4263374 - 4265458 | 79781.4 |
| dyp-type peroxidase | DWW08_18420 | Not Available | Positive | 4265673 - 4266623 | 35261.6 |
| duf4906 domain-containing protein | DWW08_18425 | Not Available | Negative | 4266627 - 4268798 | 78351.9 |
| hypothetical protein | DWW08_18430 | Not Available | Negative | 4268978 - 4269940 | 37390.1 |
| hypothetical protein | DWW08_18435 | Not Available | Positive | 4270015 - 4270167 | 6072.6 |
| hypothetical protein | DWW08_18440 | Not Available | Positive | 4270175 - 4271554 | 50183.4 |
| hypothetical protein | DWW08_18445 | Not Available | Positive | 4271566 - 4272495 | 35587.0 |
| lysine exporter lyso family protein | DWW08_18450 | Not Available | Negative | 4272496 - 4273116 | 22450.3 |
| duf340 domain-containing protein | DWW08_18455 | Not Available | Negative | 4273113 - 4273391 | 10047.9 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



