Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase uvrb | DWW08_13830 | Not Available | Positive | 3216494 - 3217063 | 21233.4 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DWW08_13835 | Not Available | Positive | 3217069 - 3217758 | 26095.4 |
| duf4836 family protein | DWW08_13840 | Not Available | Positive | 3217785 - 3219338 | 57032.7 |
| atp-binding cassette domain-containing protein | DWW08_13845 | Not Available | Positive | 3219349 - 3219993 | 24506.5 |
| abc transporter permease | DWW08_13850 | Not Available | Positive | 3219990 - 3221195 | 45237.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DWW08_13855 | Not Available | Positive | 3221409 - 3222335 | 35717.2 |
| lipid kinase | DWW08_13860 | Not Available | Positive | 3222626 - 3223552 | 35029.6 |
| 3-deoxy-8-phosphooctulonate synthase | DWW08_13865 | Not Available | Positive | 3223568 - 3224371 | 29160.7 |
| insulinase family protein | DWW08_13870 | Not Available | Positive | 3224526 - 3227345 | 106664.0 |
| hypothetical protein | DWW08_13875 | Not Available | Positive | 3227509 - 3228990 | 56596.1 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



