Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW08_12845 | Not Available | Negative | 2971027 - 2974464 | 129164.0 |
| duf4974 domain-containing protein | DWW08_12850 | Not Available | Negative | 2974602 - 2975600 | 37933.5 |
| rna polymerase sigma-70 factor | DWW08_12855 | Not Available | Negative | 2975690 - 2976247 | 21618.0 |
| type i pullulanase | DWW08_12860 | Not Available | Negative | 2976427 - 2978427 | 74278.0 |
| crossover junction endodeoxyribonuclease ruvc | DWW08_12865 | Not Available | Negative | 2978477 - 2979043 | 21022.2 |
| duf4286 family protein | DWW08_12870 | Not Available | Negative | 2979040 - 2979342 | 11852.2 |
| Trna-ala | Not Available | Not Available | Positive | 2979457 - 2979530 | Not Available |
| hypothetical protein | DWW08_12880 | Not Available | Negative | 2979750 - 2980928 | 45312.3 |
| phenylalanine--trna ligase subunit alpha | DWW08_12885 | Not Available | Positive | 2981428 - 2982447 | 38476.0 |
| mfs transporter | DWW08_12890 | Not Available | Positive | 2982616 - 2983809 | 43430.4 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



