Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase | DWW08_12490 | Not Available | Negative | 2878260 - 2879918 | 61601.3 |
| exo-alpha-sialidase | DWW08_12495 | Not Available | Negative | 2879942 - 2881042 | 40913.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_12500 | Not Available | Negative | 2881135 - 2882595 | 55113.4 |
| tonb-dependent receptor | DWW08_12505 | Not Available | Negative | 2882609 - 2885905 | 121359.0 |
| n-acetylneuraminate lyase | DWW08_12510 | Not Available | Negative | 2885996 - 2886904 | 33333.6 |
| fadr family transcriptional regulator | DWW08_12515 | Not Available | Negative | 2887110 - 2887949 | 32203.8 |
| prephenate dehydratase | DWW08_12520 | Not Available | Positive | 2888341 - 2889186 | 31928.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWW08_12525 | Not Available | Positive | 2889161 - 2890345 | 44293.3 |
| 3-deoxy-7-phosphoheptulonate synthase | DWW08_12530 | Not Available | Positive | 2890368 - 2891429 | 39611.0 |
| prephenate dehydrogenase | DWW08_12535 | Not Available | Positive | 2891445 - 2892218 | 29398.5 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



