Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | DWW08_12045 | Not Available | Positive | 2785178 - 2786851 | 63162.3 |
| hypothetical protein | DWW08_12055 | Not Available | Positive | 2787010 - 2787225 | 6988.19 |
| 50s ribosomal protein l9 | DWW08_12060 | Not Available | Negative | 2787461 - 2787904 | 15955.6 |
| 30s ribosomal protein s18 | DWW08_12065 | Not Available | Negative | 2787916 - 2788188 | 10688.4 |
| 30s ribosomal protein s6 | DWW08_12070 | Not Available | Negative | 2788191 - 2788535 | 13414.2 |
| marr family transcriptional regulator | DWW08_12075 | Not Available | Positive | 2788697 - 2789143 | 17387.2 |
| dna-binding response regulator | DWW08_12080 | Not Available | Negative | 2789534 - 2790235 | 26833.6 |
| sensor histidine kinase | DWW08_12085 | Not Available | Negative | 2790237 - 2791796 | 60029.9 |
| elongation factor g | DWW08_12090 | Not Available | Negative | 2792186 - 2794342 | 80154.2 |
| coproporphyrinogen iii oxidase family protein | DWW08_12100 | Not Available | Positive | 2795178 - 2796311 | 43868.9 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



