Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein lptd | DWW08_11940 | Not Available | Negative | 2756171 - 2758879 | 103494.0 |
| hd domain-containing protein | DWW08_11945 | Not Available | Negative | 2758969 - 2759505 | 20468.7 |
| beta-n-acetylhexosaminidase | DWW08_11950 | Not Available | Positive | 2759969 - 2762275 | 86348.6 |
| hypothetical protein | DWW08_11955 | Not Available | Positive | 2762476 - 2764569 | 79192.9 |
| cpbp family intramembrane metalloprotease | DWW08_11960 | Not Available | Negative | 2764592 - 2765332 | 28356.2 |
| n-acetyltransferase | DWW08_11965 | Not Available | Negative | 2765592 - 2766062 | 18484.9 |
| transporter | DWW08_11970 | Not Available | Negative | 2766186 - 2767079 | 32807.4 |
| n-acetylmuramoyl-l-alanine amidase | DWW08_11975 | Not Available | Positive | 2767188 - 2768441 | 47175.4 |
| mce family protein | DWW08_11980 | Not Available | Positive | 2768461 - 2769354 | 32876.3 |
| chromosomal replication initiator protein dnaa | DWW08_11985 | Not Available | Positive | 2769703 - 2771130 | 54187.0 |
Pathways
921 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



