Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW08_11780 | Not Available | Negative | 2713852 - 2715738 | 71560.1 |
| tonb-dependent receptor | DWW08_11785 | Not Available | Negative | 2715768 - 2719220 | 128445.0 |
| duf4974 domain-containing protein | DWW08_11790 | Not Available | Negative | 2719349 - 2720548 | 45326.9 |
| sigma-70 family rna polymerase sigma factor | DWW08_11795 | Not Available | Negative | 2720648 - 2721226 | 22764.8 |
| chorismate synthase | DWW08_11800 | Not Available | Positive | 2721487 - 2722563 | 39234.8 |
| dipeptidase | DWW08_11805 | Not Available | Positive | 2722576 - 2723940 | 50350.6 |
| linear amide c-n hydrolase | DWW08_11810 | Not Available | Negative | 2724048 - 2725100 | 39280.9 |
| aldehyde dehydrogenase family protein | DWW08_11815 | Not Available | Negative | 2725168 - 2728488 | 124595.0 |
| duf4396 domain-containing protein | DWW08_11825 | Not Available | Negative | 2728845 - 2729567 | 27304.4 |
| dna topoisomerase iii | DWW08_11830 | Not Available | Negative | 2729657 - 2731807 | 81055.5 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



