Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | DWW08_11465 | Not Available | Negative | 2632789 - 2633562 | 27416.3 |
| biosynthetic arginine decarboxylase | DWW08_11470 | Not Available | Negative | 2633696 - 2635588 | 71235.8 |
| hypothetical protein | DWW08_11475 | Not Available | Negative | 2635646 - 2636725 | 42527.4 |
| hsp90 family protein | DWW08_11480 | Not Available | Negative | 2636734 - 2638500 | 66938.1 |
| sel1 repeat family protein | DWW08_11485 | Not Available | Negative | 2638507 - 2641005 | 94929.6 |
| shikimate kinase | DWW08_11490 | Not Available | Negative | 2641153 - 2641692 | 20829.2 |
| arac family transcriptional regulator | DWW08_11495 | Not Available | Negative | 2641829 - 2642731 | 35592.4 |
| hypothetical protein | DWW08_11500 | Not Available | Negative | 2642791 - 2643000 | 8404.39 |
| hypothetical protein | DWW08_11505 | Not Available | Positive | 2643361 - 2643723 | 14206.2 |
| tonb-dependent receptor | DWW08_11510 | Not Available | Positive | 2643747 - 2646848 | 113824.0 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



