Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | DW170_03505 | Not Available | Positive | 719718 - 720980 | 48372.3 |
| rna polymerase sigma-70 factor | DW170_03510 | Not Available | Positive | 721033 - 721584 | 21927.4 |
| anti-sigma factor | DW170_03515 | Not Available | Positive | 721581 - 722429 | 31875.2 |
| carboxypeptidase-like regulatory domain-containing protein | DW170_03520 | Not Available | Positive | 722454 - 724013 | 59746.4 |
| dmt family transporter | DW170_03525 | Not Available | Negative | 724032 - 724931 | 33094.1 |
| mate family efflux transporter | DW170_03530 | Not Available | Positive | 725020 - 726363 | 48835.5 |
| ompa family protein | DW170_03535 | Not Available | Positive | 726518 - 727192 | 23127.8 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DW170_03540 | Not Available | Positive | 727316 - 728062 | 28600.5 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW170_03545 | Not Available | Negative | 728166 - 730043 | 71359.4 |
| susc/raga family tonb-linked outer membrane protein | DW170_03550 | Not Available | Negative | 730077 - 733454 | 124658.0 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



