Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | DWW08_11265 | Not Available | Positive | 2580308 - 2582266 | 73118.7 |
| asma family protein | DWW08_11270 | Not Available | Negative | 2582362 - 2585328 | 110248.0 |
| duf3109 family protein | DWW08_11275 | Not Available | Negative | 2585325 - 2585906 | 22072.5 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DWW08_11280 | Not Available | Negative | 2585967 - 2587481 | 55639.0 |
| magnesium transporter cora family protein | DWW08_11285 | Not Available | Positive | 2587769 - 2588695 | 35672.6 |
| ribonuclease hii | DWW08_11290 | Not Available | Negative | 2588707 - 2589312 | 22610.1 |
| sodium-translocating pyrophosphatase | DWW08_11295 | Not Available | Negative | 2589893 - 2592097 | 77123.0 |
| hypothetical protein | DWW08_11300 | Not Available | Negative | 2592219 - 2592773 | 21848.5 |
| alpha-galactosidase | DWW08_11305 | Not Available | Positive | 2593015 - 2595174 | 82181.0 |
| rna polymerase sigma-70 factor | DWW08_11310 | Not Available | Positive | 2595408 - 2595950 | 21134.6 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



