Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding protein | DWW08_11005 | Not Available | Negative | 2504442 - 2507423 | 111428.0 |
| galactose mutarotase | DWW08_11010 | Not Available | Negative | 2507573 - 2508709 | 41681.0 |
| glycoside hydrolase family 125 protein | DWW08_11015 | Not Available | Negative | 2508852 - 2510318 | 55202.4 |
| glycoside hydrolase family 92 protein | DWW08_11020 | Not Available | Negative | 2510358 - 2512643 | 86338.1 |
| duf4965 domain-containing protein | DWW08_11025 | Not Available | Negative | 2512762 - 2515275 | 93950.8 |
| hypothetical protein | DWW08_11030 | Not Available | Negative | 2515269 - 2517431 | 82815.5 |
| alpha-1,6-mannanase | DWW08_11035 | Not Available | Negative | 2517460 - 2518578 | 43324.5 |
| arabinan endo-1,5-alpha-l-arabinosidase | DWW08_11040 | Not Available | Negative | 2519238 - 2520215 | 36582.5 |
| duf3823 domain-containing protein | DWW08_11050 | Not Available | Negative | 2520816 - 2521529 | 26654.7 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_11055 | Not Available | Negative | 2521550 - 2523403 | 69906.9 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



