Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcrf domain-containing protein | DWW08_10950 | Not Available | Negative | 2489794 - 2490910 | 42586.2 |
| long-chain fatty acid--coa ligase | DWW08_10955 | Not Available | Negative | 2490971 - 2492776 | 68436.6 |
| m20/m25/m40 family metallo-hydrolase | DWW08_10960 | Not Available | Positive | 2492966 - 2494027 | 39057.9 |
| duf1080 domain-containing protein | DWW08_10965 | Not Available | Negative | 2494397 - 2496853 | 92450.1 |
| glycoside hydrolase family 127 protein | DWW08_10970 | Not Available | Negative | 2496825 - 2498894 | 76983.9 |
| gntr family transcriptional regulator | DWW08_10975 | Not Available | Positive | 2499123 - 2500100 | 37697.1 |
| hypothetical protein | DWW08_10980 | Not Available | Negative | 2500092 - 2501471 | 51904.0 |
| hypothetical protein | DWW08_10985 | Not Available | Negative | 2501537 - 2502583 | 38684.4 |
| hypothetical protein | DWW08_10995 | Not Available | Positive | 2503119 - 2503349 | 8631.57 |
| 1,4-beta-xylanase | DWW08_11000 | Not Available | Negative | 2503322 - 2504290 | 36775.1 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



