Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DWW08_10845 | Not Available | Positive | 2460093 - 2461739 | 59874.6 |
| sensor histidine kinase | DWW08_10850 | Not Available | Positive | 2462063 - 2462845 | 30019.0 |
| fimbrillin family protein | DWW08_10855 | Not Available | Negative | 2463186 - 2464016 | 29164.2 |
| hypothetical protein | DWW08_10860 | Not Available | Negative | 2464182 - 2465057 | 30190.6 |
| hypothetical protein | DWW08_10865 | Not Available | Negative | 2465253 - 2466152 | 34011.7 |
| had family hydrolase | DWW08_10870 | Not Available | Positive | 2466281 - 2466967 | 25813.0 |
| qace family quaternary ammonium compound efflux smr transporter | DWW08_10875 | Not Available | Negative | 2466977 - 2467303 | 11960.3 |
| subclass b1 metallo-beta-lactamase cfia2 | DWW08_10880 | Not Available | Negative | 2467530 - 2468279 | 27170.6 |
| tonb-dependent receptor | DWW08_10885 | Not Available | Positive | 2468714 - 2472067 | 124459.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_10890 | Not Available | Positive | 2472085 - 2473932 | 69749.4 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



