Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (fe-s)-binding protein | DWW08_10695 | Not Available | Positive | 2423666 - 2424406 | 27462.4 |
| lactate utilization protein | DWW08_10700 | Not Available | Positive | 2424403 - 2425788 | 51532.9 |
| hypothetical protein | DWW08_10705 | Not Available | Positive | 2425785 - 2426363 | 21267.5 |
| pyridoxamine kinase | DWW08_10710 | Not Available | Positive | 2426422 - 2427294 | 32817.5 |
| hypothetical protein | DWW08_10715 | Not Available | Negative | 2427376 - 2427690 | 10999.2 |
| duf3520 domain-containing protein | DWW08_10720 | Not Available | Negative | 2427893 - 2429719 | 66739.4 |
| sigma-70 family rna polymerase sigma factor | DWW08_10725 | Not Available | Positive | 2429831 - 2430406 | 22806.5 |
| hypothetical protein | DWW08_10730 | Not Available | Positive | 2430403 - 2431569 | 42625.1 |
| Trna-trp | Not Available | Not Available | Positive | 2431616 - 2431691 | Not Available |
| arsenate reductase family protein | DWW08_10740 | Not Available | Negative | 2431757 - 2432110 | 13468.6 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



