Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | DWW08_10435 | Not Available | Positive | 2360663 - 2361205 | 20513.3 |
| capsular biosynthesis protein | DWW08_10440 | Not Available | Positive | 2361202 - 2361918 | 27136.5 |
| killer suppression protein higa | DWW08_10445 | Not Available | Positive | 2362141 - 2362479 | 13163.8 |
| imma/irre family metallo-endopeptidase | DWW08_10450 | Not Available | Positive | 2362488 - 2363594 | 42263.0 |
| cold shock domain-containing protein | DWW08_10455 | Not Available | Positive | 2363951 - 2364391 | 16738.7 |
| hypothetical protein | DWW08_10460 | Not Available | Negative | 2364618 - 2365517 | 34778.6 |
| insulinase family protein | DWW08_10465 | Not Available | Negative | 2365498 - 2368362 | 109187.0 |
| duf4929 domain-containing protein | DWW08_10470 | Not Available | Negative | 2368349 - 2369551 | 45177.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWW08_10475 | Not Available | Negative | 2369569 - 2371017 | 55571.0 |
| susc/raga family tonb-linked outer membrane protein | DWW08_10480 | Not Available | Negative | 2371031 - 2374081 | 113261.0 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



