Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | DWW08_10275 | Not Available | Positive | 2333251 - 2333856 | 21244.2 |
| n-acetyltransferase | DWW08_10280 | Not Available | Negative | 2333882 - 2334391 | 19635.8 |
| duf3843 family protein | DWW08_10285 | Not Available | Positive | 2334464 - 2335468 | 38845.8 |
| hypothetical protein | DWW08_10290 | Not Available | Positive | 2335437 - 2335589 | 5397.64 |
| ribose 5-phosphate isomerase a | DWW08_10295 | Not Available | Positive | 2335619 - 2336320 | 26043.7 |
| dna-binding protein | DWW08_10305 | Not Available | Negative | 2336617 - 2337087 | 17071.3 |
| duf4248 domain-containing protein | DWW08_10310 | Not Available | Positive | 2337355 - 2337600 | 9589.63 |
| hypothetical protein | DWW08_10315 | Not Available | Negative | 2337801 - 2338217 | 15724.0 |
| hypothetical protein | DWW08_10320 | Not Available | Negative | 2338249 - 2339775 | 58570.7 |
| virulence protein e | DWW08_10330 | Not Available | Negative | 2340284 - 2342443 | 82888.4 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



