Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DWW08_10225 | Not Available | Positive | 2320957 - 2322123 | 42707.8 |
| rip metalloprotease rsep | DWW08_10230 | Not Available | Positive | 2322143 - 2323498 | 51232.0 |
| hypothetical protein | DWW08_10235 | Not Available | Negative | 2323601 - 2324479 | 33666.3 |
| phosphonoacetaldehyde hydrolase | DWW08_10240 | Not Available | Positive | 2324673 - 2325464 | 29141.3 |
| 2-aminoethylphosphonate--pyruvate transaminase | DWW08_10245 | Not Available | Positive | 2325471 - 2326559 | 40760.9 |
| dha2 family efflux mfs transporter permease subunit | DWW08_10250 | Not Available | Negative | 2326567 - 2327973 | 50124.1 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | DWW08_10255 | Not Available | Negative | 2328209 - 2328673 | 17564.8 |
| anaerobic ribonucleoside triphosphate reductase | DWW08_10260 | Not Available | Negative | 2328681 - 2331074 | 90348.8 |
| hemolysin iii family protein | DWW08_10265 | Not Available | Negative | 2331414 - 2332064 | 23612.1 |
| diaminopimelate dehydrogenase | DWW08_10270 | Not Available | Negative | 2332193 - 2333092 | 32315.2 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



