Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | DWW08_10175 | Not Available | Negative | 2311537 - 2312151 | 22871.3 |
| yicc family protein | DWW08_10180 | Not Available | Negative | 2312164 - 2313042 | 33815.6 |
| hypothetical protein | DWW08_10185 | Not Available | Positive | 2313340 - 2313543 | 7297.73 |
| histidine kinase | DWW08_10190 | Not Available | Negative | 2313671 - 2315299 | 63063.0 |
| sensor histidine kinase | DWW08_10195 | Not Available | Negative | 2315296 - 2316603 | 49894.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DWW08_10200 | Not Available | Positive | 2316780 - 2317469 | 25292.7 |
| duf4290 domain-containing protein | DWW08_10205 | Not Available | Positive | 2317519 - 2318136 | 24475.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DWW08_10210 | Not Available | Positive | 2318184 - 2319488 | 47309.7 |
| 16s rrna processing protein rimm | DWW08_10215 | Not Available | Positive | 2319485 - 2320027 | 20645.1 |
| m23 family peptidase | DWW08_10220 | Not Available | Positive | 2320094 - 2320954 | 32427.9 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



