Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWW08_10075 | Not Available | Negative | 2288488 - 2289036 | 20918.8 |
| hypothetical protein | DWW08_10080 | Not Available | Negative | 2289033 - 2289659 | 23412.1 |
| orf6n domain-containing protein | DWW08_10085 | Not Available | Positive | 2289778 - 2290350 | 21790.3 |
| rrna cytosine-c5-methyltransferase | DWW08_10090 | Not Available | Positive | 2290347 - 2291765 | 52645.1 |
| hypothetical protein | DWW08_10095 | Not Available | Positive | 2291801 - 2292547 | 27291.8 |
| tolc family protein | DWW08_10100 | Not Available | Negative | 2292693 - 2293871 | 44413.0 |
| acrb/acrd/acrf family protein | DWW08_10105 | Not Available | Negative | 2294031 - 2297117 | 112147.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWW08_10110 | Not Available | Negative | 2297202 - 2298440 | 44500.1 |
| hypothetical protein | DWW08_10115 | Not Available | Negative | 2298611 - 2299015 | 15400.7 |
| hypothetical protein | DWW08_10120 | Not Available | Negative | 2299140 - 2299415 | 9907.21 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



