Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase | DWW08_09975 | Not Available | Positive | 2271856 - 2273088 | 45744.9 |
| sdr family nad(p)-dependent oxidoreductase | DWW08_09980 | Not Available | Positive | 2273085 - 2273954 | 32436.7 |
| 6-phosphofructokinase | DWW08_09985 | Not Available | Negative | 2274015 - 2274995 | 35221.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DWW08_09990 | Not Available | Negative | 2275069 - 2275941 | 32832.4 |
| (d)cmp kinase | DWW08_09995 | Not Available | Negative | 2276054 - 2276743 | 25705.7 |
| energy transducer tonb | DWW08_10000 | Not Available | Positive | 2276899 - 2277582 | 25795.0 |
| polyprenyl synthetase family protein | DWW08_10005 | Not Available | Positive | 2277663 - 2278637 | 36980.8 |
| hypothetical protein | DWW08_10010 | Not Available | Positive | 2278645 - 2279355 | 27380.0 |
| tatd family deoxyribonuclease | DWW08_10015 | Not Available | Positive | 2279359 - 2280135 | 29269.3 |
| Trna-ser | Not Available | Not Available | Positive | 2280297 - 2280384 | Not Available |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



