Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWW08_09760 | Not Available | Negative | 2220249 - 2221517 | 49277.0 |
| abc transporter permease | DWW08_09765 | Not Available | Negative | 2221539 - 2222804 | 47057.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | DWW08_09770 | Not Available | Negative | 2222925 - 2224172 | 46175.8 |
| lysm peptidoglycan-binding domain-containing protein | DWW08_09780 | Not Available | Negative | 2224472 - 2225371 | 34452.2 |
| cytidine deaminase | DWW08_09785 | Not Available | Positive | 2225488 - 2225970 | 17702.1 |
| arac family transcriptional regulator | DWW08_09790 | Not Available | Positive | 2225973 - 2226812 | 32733.1 |
| duf417 domain-containing protein | DWW08_09795 | Not Available | Positive | 2226900 - 2227502 | 22133.2 |
| pyridine nucleotide-disulfide oxidoreductase | DWW08_09800 | Not Available | Positive | 2227561 - 2228937 | 50052.3 |
| abc transporter atp-binding protein | DWW08_09805 | Not Available | Positive | 2229211 - 2230800 | 59867.1 |
| nad(+) diphosphatase | DWW08_09810 | Not Available | Positive | 2230832 - 2231611 | 29311.0 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



