Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-alanine antiporter | DWW08_09660 | Not Available | Positive | 2193448 - 2195145 | 60805.3 |
| aspartate 4-decarboxylase | DWW08_09665 | Not Available | Positive | 2195184 - 2196830 | 62556.1 |
| pas domain-containing sensor histidine kinase | DWW08_09670 | Not Available | Negative | 2196819 - 2198111 | 48748.6 |
| sigma-54-dependent fis family transcriptional regulator | DWW08_09675 | Not Available | Negative | 2198155 - 2199504 | 50041.1 |
| tolc family protein | DWW08_09680 | Not Available | Negative | 2199557 - 2201029 | 55767.2 |
| pas domain-containing sensor histidine kinase | DWW08_09685 | Not Available | Negative | 2201310 - 2203922 | 98682.9 |
| abc transporter permease | DWW08_09690 | Not Available | Negative | 2204019 - 2205263 | 48033.2 |
| abc transporter permease | DWW08_09695 | Not Available | Negative | 2205278 - 2206576 | 47618.2 |
| duf2807 domain-containing protein | DWW08_09700 | Not Available | Negative | 2206587 - 2207216 | 22206.8 |
| abc transporter atp-binding protein | DWW08_09705 | Not Available | Negative | 2207271 - 2207936 | 24681.0 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



