Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DWW08_09605 | Not Available | Negative | 2184948 - 2185430 | 18818.9 |
| capsular polysaccharide transcription antiterminator upfy | DWW08_09610 | Not Available | Negative | 2185442 - 2186002 | 21624.2 |
| hypothetical protein | DWW08_09615 | Not Available | Positive | 2186787 - 2187017 | 8780.53 |
| hypothetical protein | DWW08_09620 | Not Available | Positive | 2187088 - 2187435 | 13952.7 |
| duf4373 domain-containing protein | DWW08_09625 | Not Available | Positive | 2187589 - 2188503 | 34117.0 |
| hypothetical protein | DWW08_09635 | Not Available | Positive | 2189466 - 2189972 | 19181.2 |
| hypothetical protein | DWW08_09640 | Not Available | Positive | 2189938 - 2190390 | 17711.6 |
| helix-turn-helix domain-containing protein | DWW08_09645 | Not Available | Negative | 2190454 - 2190855 | 15041.7 |
| fic family protein | DWW08_09650 | Not Available | Positive | 2190973 - 2192259 | 49364.5 |
| upf0104 family protein | DWW08_09655 | Not Available | Negative | 2192327 - 2193316 | 37036.7 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



