Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW170_03280 | Not Available | Positive | 670113 - 670316 | 7732.23 |
| tetratricopeptide repeat protein | DW170_03285 | Not Available | Positive | 670324 - 671058 | 27995.2 |
| type vi secretion system transmembrane protein tssn | DW170_03290 | Not Available | Positive | 671101 - 671949 | 32847.4 |
| type vi secretion system membrane-associated complex protein tssg | DW170_03300 | Not Available | Positive | 673121 - 674077 | 36076.6 |
| type vi secretion system transmembrane protein tssq | DW170_03305 | Not Available | Positive | 674083 - 674586 | 19082.6 |
| type vi secretion system transmembrane protein tsso | DW170_03310 | Not Available | Positive | 674599 - 675126 | 20578.9 |
| pkd domain-containing protein | DW170_03315 | Not Available | Positive | 675123 - 676016 | 34748.4 |
| type vi secretion system protein tssr | DW170_03320 | Not Available | Positive | 676018 - 678390 | 89681.4 |
| hypothetical protein | DW170_03325 | Not Available | Positive | 678431 - 678799 | 13955.7 |
| capsule biosynthesis protein | DW170_03330 | Not Available | Negative | 679003 - 681252 | 82742.6 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



