Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactokinase | DWW08_09035 | Not Available | Positive | 2053558 - 2054712 | 42744.8 |
| transketolase | DWW08_09040 | Not Available | Positive | 2054867 - 2056876 | 72041.9 |
| ribose 5-phosphate isomerase b | DWW08_09045 | Not Available | Positive | 2056958 - 2057392 | 16083.2 |
| tetratricopeptide repeat protein | DWW08_09055 | Not Available | Positive | 2058095 - 2058370 | 10620.7 |
| 4fe-4s dicluster domain-containing protein | DWW08_09060 | Not Available | Positive | 2058389 - 2058616 | 7975.8 |
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DWW08_09065 | Not Available | Positive | 2058628 - 2059710 | 39136.7 |
| hypothetical protein | DWW08_09070 | Not Available | Positive | 2059721 - 2059894 | 6680.52 |
| 2-oxoglutarate oxidoreductase | DWW08_09075 | Not Available | Positive | 2059989 - 2060750 | 27957.9 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DWW08_09080 | Not Available | Positive | 2060769 - 2061311 | 19834.6 |
| hypothetical protein | DWW08_09085 | Not Available | Positive | 2061434 - 2063476 | 78766.2 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



