Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Bacteroides fragilis strain AM15-16 AM15-16.Scaf40, whole genome
Gene Summary
Adenine Count
1509830 bp
Thymine Count
1489963 bp
Guanine Count
1128886 bp
Cytosine Count
1163404 bp
Genome Length
5292183 bp
Protein-coding Genes
4501 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase | DWW08_08785 | Not Available | Negative | 1995912 - 1997096 | 46016.5 |
| n-acetylneuraminate lyase | DWW08_08790 | Not Available | Negative | 1997120 - 1998037 | 34019.1 |
| rok family transcriptional regulator | DWW08_08795 | Not Available | Positive | 1998336 - 1999544 | 44469.0 |
| cupin fold metalloprotein, wbuc family | DWW08_08800 | Not Available | Negative | 1999541 - 2000056 | 19710.0 |
| upxy family transcription antiterminator | DWW08_08805 | Not Available | Negative | 2000002 - 2000535 | 19917.4 |
| chain-length determining protein | DWW08_08810 | Not Available | Negative | 2000511 - 2001623 | 40861.2 |
| capsule biosynthesis protein | DWW08_08815 | Not Available | Negative | 2001629 - 2004187 | 95034.4 |
| polysaccharide biosynthesis protein | DWW08_08820 | Not Available | Negative | 2004302 - 2006206 | 72113.7 |
| Trna-thr | Not Available | Not Available | Positive | 2006405 - 2006477 | Not Available |
| dna/rna non-specific endonuclease | DWW08_08830 | Not Available | Positive | 2006630 - 2007505 | 33189.9 |
Pathways
1047 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



